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Information • Textbooks • Media • Resources
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JCE Software
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MacMS: A Mass Spectrometer Simulator: Abstract of Issue 9906M
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Stephen W. Bigger
Victoria University of Technology, Melbourne, 8001, Australia
Robert A. Craig
School of Chemistry, The University of Melbourne, Parkville, 3052, Australia
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October 1999 Vol. 76 No. 10 p. 1464
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| Full Text |
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MacMS is a program for Mac-OS compatible
computers that simulates a magnetic sector mass spectrometer
(1-4) designed to operate in the mass-to-charge
(m/z) ratio range of 1-200 amu. MacMS has two operational modules.
The first module (see Figure 1) is called the "Path" module
and enables the user to quantitatively examine the trajectory
of an ion of given m/z ratio in the electric and magnetic
fields of the simulated "instrument". By systematically
measuring a series of trajectories of different ions under different
electric and magnetic field conditions, the user can
determine how the resolution of the "instrument" is affected by
these experimentally variable parameters. The user can thus
choose suitable instrumental conditions for scanning a given
m/z ratio range with good separation between the peaks.
The second module (see Figure 2) is called as the
"Spectrometer" module and enables the user to record, under
any chosen instrumental conditions, the mass spectrum of (i)
the instrumental background, (ii) neon, (iii) methane, or (iv)
the parent ion of carbon tetrachloride. Both voltage scanning
and magnetic scanning are possible (5). A hard copy of any
mass spectrum that has been recorded can also be
obtained. MacMS can read ASCII data files containing mass
spectral information of compounds other than those that are
"built-in" to the simulator. The appropriate format for creating
such data files is described in the program documentation.
There are a number of instructional exercises that can
be conducted using the mass spectral information
contained within the simulator. These are included in the program
documentation. For example, the intensities of the
20Ne+,
21Ne+, and
22Ne+ species can be determined from hard copies of
mass spectra of neon that are obtained under different
instrumental sensitivities. The relative abundances of the three
isotopes of neon can thus be calculated and compared with the
literature values (6). The simulator also includes adjustable,
fixed-value range and gain settings, which can be used to
enhance the resolution and sensitivity of the instrument respectively.
Figure 1. The "Path" module of MacMS showing the control panel (upper section) and graphics display region (lower section). The graphics display region incorporates a "data collector", which includes a "Grab" button to collect data and an area where data are displayed.
Figure 2. The "Spectrometer" module of MacMS showing the control panel (upper section) and a graphics display region (lower section). A mass spectrum is produced in the graphics display region upon scanning. A "data collector" similar to that of the "Path" module forms part of the graphics display region.
Hardware and Software Requirements
Literature Cited
- Kiser, R. N. Introduction to Mass Spectrometry and its
Applications; Prentice-Hall: Englewood Cliffs, N. J., 1965; pp 1-3; pp 32-65.
- Johnstone, R. A. W.; Rose, M. E.
Mass Spectrometry for Chemists and
Biochemists, 2nd ed.; Cambridge University Press:
Cambridge, 1996.
- Hill, H. C.; Loudon, A. G.
Introduction to Mass Spectrometry; 2nd ed.; Heyden: London, 1972; p 5.
- Farmer, J. B. In
Mass Spectrometry, McDowell, C. A., Ed.; McGraw-Hill: New York, 1963; pp 10-11.
- Message, G. M. Practical Aspects of Gas Chromatography-Mass
Spectrometry, Wiley: New York, 1984; Chapter 3.
- CRC Handbook of Chemistry and
Physics, 55th ed.; CRC: Cleveland, 1974.
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| More Information |
 Citation
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Bigger, Stephen W.; Craig, Robert A. J. Chem. Educ. 1999 76 1464.
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 Keywords
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Teaching / Learning Aids; Computer Assisted Instruction; Mass Spectrometry
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 History
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Created:
Last Updated: |
September 6, 1999
June 23, 2005
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| Home > JCE Print > Journal of Chemical Education > Issues >
1999
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October
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