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  Home > JCE Print > Journal of Chemical Education > Issues > 2002  > November  >
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Computer Bulletin Board
Using Computer Graphics to Demonstrate the Origin and Applications of the "Reacting Bond Rules"
David R. Tyler and David R. Herrick
Department of Chemistry, University of Oregon, Eugene, OR 97403-1253

Cover
November 2002
Vol. 79 No. 11
p. 1372

Abstract

The reacting bond rules, also known as Thornton's rules, describe how the structure and energy of a transition state vary as a function of changes in the energies of selected reaction parameters. The rules have many applications in the interpretation of reactivity. The derivation of the "reacting bond rules" is demonstrated using the graphics plotting routines available on programs such as Mathematica. Using these same graphics plotting programs, the relationship between three-dimensional energy plots, two-dimensional More O'Ferrall–Jencks diagrams, and reaction coordinate diagrams is shown for the case of SN1 and SN2 substitution reactions. The graphical methods discussed herein are not restricted to substitution reactions but are easily extended to other types of reactions.

Supplement
A plot showing the effect on the transition state of a linear perturbation that decreases the energy of the products, the functions used by Dunn to construct an energy surface, and the routines for entering the functions in Mathematica and then plotting are available.
*  Contents JCE2002p1372W.doc (Microsoft Word)
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More Information
*  Citation
Tyler, David R.; Herrick, David R. J. Chem. Educ. 2002 79 1372.
*  Keywords
Computational Chemistry; Mechanisms; Organic Chemistry; Physical Chemistry
*  History
Created:
Last Updated:
September 30, 2002
June 9, 2005
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