The featured molecules for this month come from the Green Chemistry article, "Microwave-Assisted Heterocyclic Chemistry for the Undergraduate Organic Laboratory" by Musiol, Tyman-Szram, and Polanski. The authors give conditions and yields for the solid-phase synthesis of a number of heterocyclic compounds in a microwave oven. Although the jury is still out on the detailed mechanism behind microwave acceleration of reaction rates, there is a great deal of interest in such reactions in the chemical community. Students encountering heterocyclic species for the first time might find it useful to consider the effect of addition of a heteroatom on the electron distribution in the molecule. The Chime plug-in enables the user to construct a qualitative electrostatic potential map, allowing students to visualize this map in three-dimensions. Details of this process are available as Supplemental Material.
Fully manipulable (Chime and Jmol) versions of these molecules are available at the JCE Digital Library Web site.
Figure 1. benzimidazole
Figure 2. succinic anhydride
Figure 3. phthalimide
Figure 4. piperazine-2,5-dione
Figure 5. 2,3-diphenylquinoxaline
Figure 6. 5,5-diphenylhydantoin
Figure 7. benzoxazinone
Supplement
Details of the process of using Chime to construct a qualitative electrostatic potential map are available here [Macromedia Flash video].
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