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  Home > JCE Print > Journal of Chemical Education > Issues > 2006  > July  >
In the Laboratory
Usnic Acid and the Intramolecular Hydrogen Bond. A Computational Experiment for the Organic Laboratory
Thomas K. Green
Department of Chemistry & Biochemistry, University of Alaska Fairbanks, Fairbanks, AK 99775

Charles A. Lane
Department of Chemistry, University of Alaska Anchorage, Anchorage, AK 99508

Cover
July 2006
Vol. 83 No. 7
p. 1046

Abstract

A computational experiment is described for the organic chemistry laboratory that allows students to estimate the relative strengths of the intramolecular hydrogen bonds of usnic and isousnic acids, two related lichen secondary metabolites. Students first extract and purify usnic acid from common lichens and obtain 1H NMR and IR spectra. The 1H NMR spectrum reveals three downfield singlets at 11.1, 13.3, and 18.9 ppm, which correspond to three intramolecular hydrogen bonds. The IR spectrum additionally reveals three carbonyl stretching frequencies, which represent the hydrogen bond acceptors in usnic acid. The AM1 semi-empirical method is then employed to calculate (i) the heats of hydrogen bond formation, (ii) the atomic charges on the bridging hydrogens, (iii) the bond lengths of the acceptor carbonyl groups, and (iv) carbonyl IR stretching frequencies. The computed properties are then correlated to NMR and IR spectroscopic properties to reinforce fundamental concepts of the hydrogen bond.

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Supplement
Instructions for the students and notes for the instructor are available.
*  Contents JCE2006p1046W.doc (Microsoft Word)
*  Download
JCE2006p1046W.pdf

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More Information
*  Citation
Green, Thomas K.; Lane, Charles A. J. Chem. Educ. 2006 83 1046.
*  Keywords
Computational Chemistry; Computer-Based Learning; Hands-On Learning / Manipulatives; Hydrogen Bonding; IR Spectroscopy; Laboratory Computing / Interfacing; Laboratory Instruction; NMR Spectroscopy; Organic Chemistry; Second-Year Undergraduate
*  History
Created:
Last Updated:
5/26/2006
5/31/2006
  Home > JCE Print > Journal of Chemical Education > Issues > 2006  > July  > Page 1046


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